Publications

#TeamTitleAuthorYearJournalVolissuepageDoiPubMed link
1GenomicsCharacterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek). Sithichoke Tangphatsornruang, Prakit Somta, Pichahpuk Uthaipaisanwong, Juntima Chanprasert, Duanjai Sangsrakru, Worapa Seehalak, Warunee Sommanas, Somvong Tragoonrung and Peerasak Srinives 2009BMC Plant Biology9-13710.1186/1471-2229-9-137https://pubmed.ncbi.nlm.nih.gov/19930676/
2GenomicsConstruction of a genetic linkage map using simple sequence repeat markers from expressed sequence tags for cassava (Manihot esculenta Crantz). Suparat KunKeaw, Thippawan Yoocha, Supajit Sraphet, Athipong Boonchanawiwat, Opas Boonseng, David A. Lightfoot, Kanokporn Triwitayakorn, and Sithichoke Tangphatsornruang 2010Molecular Breeding27167-7510.1007/s11032-010-9414-4-
3GenomicsThe complete plastid genome sequence of Vigna radiata for studies in structural organization and phylogenetic relationship. Sithichoke Tangphatsornruang, Duangjai Sangsrakru, Juntima Chanprasert, Pichahpuk Uthaipaisanwong, Thippawan Yoocha, Nukoon Jomchai, Somvong Tragoonrung 2010DNA Research17-11-2210.1093/dnares/dsp025https://pubmed.ncbi.nlm.nih.gov/20007682/
4GenomicsGenetic linkage map of cassava (Manihot esculenta Crantz) based on AFLP and SSR markers. Suparat Kunkeaw, Sithichoke Tangphatsornruang, Duncan R. Smith and Kanokporn Triwitayakorn 2010Plant Breeding129-112-11510.1111/j.1439-0523.2009.01623.x-
5GenomicsSSR and EST-SSR based genetic linkage map of cassava (Manihot esculenta Crantz). Supajit Sraphet, Athipong Boonchanawiwat, Thanwanit Thanyasiriwat, Opas Boonseng, Satoshi Tabata, Shigemi Sasamoto, Kenta Shirasawa, Sachiko Isobe, David A Lightfoot, Sithichoke Tangphatsornruang, Kanokporn Triwitayakorn 2011Theoretical and Applied Genetics 12261161-117010.1007/s00122-010-1520-5https://pubmed.ncbi.nlm.nih.gov/21222095/
6GenomicsInsights into the phylogeny and metabolic potential of a primary tropical peat swamp forest microbial community by metagenomic analysis. Pattanop Kanokratana, Tanaporn Uengwetwanit, Ukrit Rattanachomsri, Benjarat Bunterngsook, Thidarat Nimchua, Sithichoke Tangphatsornruang, Vethachai Plengvidhya, Verawat Champreda, Lily Eurwilaichitr 2011Microbial Ecology 613518-52810.1007/s00248-010-9766-7https://pubmed.ncbi.nlm.nih.gov/21057783/
7GenomicsCharacterization of the complete chloroplast genome sequence of Hevea brasiliensis reveals genome rearrangement, RNA editing sites and phylogenetic relationships among angiosperms. Sithichoke Tangphatsornruang, Duangjai Sangsrakru, Juntima Chanprasert, Pichahpuk Uthaipaisanwong, Thippawan Yoocha, Nukoon Jomchai and Somvong Tragoonrung 2011Gene 4752104-11210.1016/j.gene.2011.01.002https://pubmed.ncbi.nlm.nih.gov/21241787/
8GenomicsA genome scan for quantitative trait loci affecting cyanogenic potential of cassava root in an outbred population. Sukhuman Whankaew, Supannee Poopear, Supanath Kanjanawattanawong, Sithichoke Tangphatsornruang, Opas Boonseng, David A. Lightfoot and Kanokporn Triwitayakorn 2011BMC Genomics12-26610.1186/1471-2164-12-266https://pubmed.ncbi.nlm.nih.gov/21609492/
9GenomicsSingle nucleotide polymorphism marker development in rubber tree, Hevea brasiliensis (Euphorbiaceae). Wirulda Pootakham, Juntima Chanprasert, Nukoon Jomchai, Duangjai Sangsrakru, Thippawan Yoocha, Somvong Tragoonrung, and Sithichoke Tangphatsornruang 2011American Journal of Botany 9811e337-810.3732/ajb.1100228https://pubmed.ncbi.nlm.nih.gov/22025294/
10GenomicsSequencing and analysis of three plasmids from Lactobacillus casei TISTR1341 and the development of plasmid-derived Escherichia coli-L. casei shuttle vectors. Marutpong Panya, Viraphong Lulitanond, Sithichoke Tangphatsornruang, Wises Namwat, Rungnapha Wannasutta, Namfon Suebwongsa, and Baltasar Mayo 2012Applied Microbiology and Biotechnology 931261-27210.1007/s00253-011-3503-0https://pubmed.ncbi.nlm.nih.gov/21822904/
11GenomicsThe chloroplast genome sequence of oil palm (Elaeis guineensis): gene annotation and phylogenetic relationships. Pichahpuk Uthaipaisanwong, Juntima Chanprasert, Jeremy R. Shearman, Duangjai Sangsrakru, Thippawan Yoocha, Nukoon Jomchai, Chatchawan Jantasuriyarat, Somvong Tragoonrung and Sithichoke Tangphatsornruang 2012Gene 5002172-18010.1016/j.gene.2012.03.061https://pubmed.ncbi.nlm.nih.gov/22487870/
12GenomicsDevelopment of genomic-derived simple sequence repeat markers in Hevea brasiliensis from 454 genome shotgun sequences. Wirulda Pootakham, Juntima Chanprasert, Nukoon Jomchai, Duangjai Sangsrakru, Thippawan Yoocha, Kanikar Therawattanasuk, and Sithichoke Tangphatsornruang 2012Plant Breeding 1314555-56210.1111/j.1439-0523.2012.01982.x-
13GenomicsMetagenomic profiles of free-living archaea, bacteria and small eukaryotes in coastal areas of Sichang island, Thailand. Naraporn Somboonna, Anunchai Assawamakin, Alisa Wilantho, Sithichoke Tangphatsornruang and Sissades Tongsima 2012BMC Genomics 13 --s2910.1186/1471-2164-13-S7-S29https://pubmed.ncbi.nlm.nih.gov/23282134/
14GenomicsFeasibility of using 454 pyrosequencing for studying quasispecies of whole dengue viral genome. Kwanrutai Chin-Inmanu, Aroonroong Suttitheptumrong, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Somvong Tragoonrung, Prida Malasit, Sumalee Tungpradabkul and Prapat Suriyaphol 2012Development and Characterization of single nucleotide polymorphism markers from 454 transcriptome sequences in oil palm (Elaeis guineensis). --s710.1186/1471-2164-13-S7-S7https://pubmed.ncbi.nlm.nih.gov/23281804/
15GenomicsDraft genome sequence of Arthrospira platensis C1 (PCC9438) Supapon Cheevadhanarak, Kalyanee Paithoonrangsarid, Peerada Prommeenate, Warunee Kaewngam, Apiluck Musigkain, Somvong Tragoonrung, Satoshi Tabata, Takakazu Kaneko, Jeerayut Chaijaruwanich, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Juntima Chanprasert, Sissades Tongsima, Kanthida Kusonmano, Wattana Jeamton, Sudarat Dulsawat, Amornpan Klanchui, Tayvich Vorapreeda, Vasunun Chumchua, Chiraphan Khannapho, Chinae Thammarongtham, Vethachai Plengvidhya, Sanjukta Subudhi, Apiradee Hongsthong, Marasri Ruengjitchatchawalya, Asawin Meechai, Jittisak Senachak, Morakot Tanticharoen 2012Standards in Genomic Sciences 6143-5310.4056/sigs.2525955https://pubmed.ncbi.nlm.nih.gov/22675597/
16GenomicsGene discovery and functional marker development for fragrance in sorghum (Sorghum bicolor (L.) Moench). Chutintorn Yundaeng, Sithichoke Tangphatsornruang, Prakit Somta, Sugunya Wongpornchai and Peerasak Srinives 2013Theoretical and Applied Genetics 126112897-290610.1007/s00122-013-2180-zhttps://pubmed.ncbi.nlm.nih.gov/23975246/
17GenomicsPhylogenetic analysis and metabolic potential of microbial communities in an industrial bagasse collection site Pattanop Kanokratana, Wuttichai Mhuanthong, Thanaporn Laotanachareon, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Kusol Pootanakit, Verawat Champreda 2013Microbial Ecology 662322-33410.1007/s00248-013-0209-0https://pubmed.ncbi.nlm.nih.gov/23504022/
18GenomicsComparative metagenomic analysis of microcosm structures and lignocellulolytic enzyme systems of symbiotic biomass-degrading consortia. Sarunyou Wongwilaiwalin, Thanaporn Laothanachareon, Wuttichai Mhauntong, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Yasuo Igarashi, and Verawat Champreda 2013Applied Microbiology and Biotechnology97208941-895410.1007/s00253-013-4699-yhttps://pubmed.ncbi.nlm.nih.gov/23381385/
19GenomicsComparative analysis of microbial profiles in cow rumen fed with different dietary fiber by tagged 16S rRNA gene pyrosequencing. Honglada Thoetkiattikul, Wuttichai Mhuantong, Thanaporn Laothanachareon, Virote Pattarajinda, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Verawat Champreda 2013Current Microbiology 672130-13710.1007/s00284-013-0336-3https://pubmed.ncbi.nlm.nih.gov/23471692/
20GenomicsDevelopment and Characterization of single nucleotide polymorphism markers from 454 transcriptome sequences in oil palm (Elaeis guineensis). Wirulda Pootakham, Pichahpuk Uthaipaisanwong, Duangjai Sangsrakru, Thippawan Yoocha, Somvong Tragoonrung and Sithichoke Tangphatsornruang 2013Plant Breeding 1326711-71710.1111/pbr.12095-
21GenomicsBacterial population in intestines of the black tiger shrimp (Penaeus monodon) under different growth stages. Wanilada Rungrassamee, Amornpan Klanchui, Sage Chaiyapechara, Sawarot Maibunkaew, Sithichoke Tangphatsornruang, Pikul Jiravanichpaisal, Nitsara Karoonuthaisiri 2013PLoS One 201384e6080210.1371/journal.pone.0060802https://pubmed.ncbi.nlm.nih.gov/23577162/
22GenomicsThe oil palm (Elaeis guineensis) linkage map, and quantitative trait locus analysis for sex ratio and related traits Kittipat Ukoskit, Vipavee Chanroj, Ganlayarat Bhusudsawang, Kwanjai Pipatchartlearnwong, Sithichoke Tangphatsornruang and Somvong Tragoonrung 2014Molecular Breeding 332415-42410.1007/s11032-013-9959-0-
23GenomicsLoci and Candidate Genes Underlying Starch Pasting Viscosity Characteristics in Cassava (Manihot esculenta Crantz). Thanwanit Thanyasiriwat, Supajit Sraphet, Sukhuman Whankaew, Opas Boonseng, Jinsong Bao, David A. Lightfoot, Sithichoke Tangphatsornruang and Kanokporn Triwitayakorn 2014Plant Biology 161197-20710.1111/plb.12022https://pubmed.ncbi.nlm.nih.gov/23614826/
24GenomicsMicrobial and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand. Naraporn Somboonna, Anunchai Assawamakin, Alisa Wilantho, Somchai Monanunsap, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Sissades Tongsima. 2014BMC Genomics 15-60710.1186/1471-2164-15-607https://pubmed.ncbi.nlm.nih.gov/25037613/
25GenomicsAssembly and analysis of a male sterile rubber tree mitochondrial genome reveals DNA rearrangement events and a novel transcript. Jeremy R. Shearman, Duangjai Sangsrakru, Panthita Ruang-areerate, Chutima Sontirod, Pichapuk Uthaipaisanwong, Thipawan Yoocha, Kanikar Theerawattanasuk, Somvong Tragoonrung, Sithichoke Tangphatsornruang 2014BMC Plant Biology14-510.1186/1471-2229-14-45https://pubmed.ncbi.nlm.nih.gov/24512148/
26GenomicsMicrobial ecology of Thailand tsunami and non-tsunami affected terrestrials. Naraporn Somboonna, Kruawun Jankaew, Anunchai Assawamakin, Alisa Wilantho, Sithichoke Tangphatsornruang, Sissades Tongsima 2014PLoS One 94e9423610.1371/journal.pone.0094236https://pubmed.ncbi.nlm.nih.gov/24710002/
27GenomicsA single base substitution in BADH/AMADH is responsible for fragrance in cucumber (Cucumis sativus L.), and development of SNAP markers for the fragrance. Chutintorn Yundaeng, Prakit Somta, Sithichoke Tangphatsornruang, Sompong Chankaew, and Peerasak Srinives 2015Theoretical and Applied Genetics 128-1881-189210.1007/s00122-015-2554-5https://pubmed.ncbi.nlm.nih.gov/26081947/
28GenomicsThe AKR gene family and modifying sex ratios in palms through abiotic stress responsiveness. Suthasinee Somyong, Supannee Poopear, Nukoon Jomchai, Pichahpuk Uthaipaisanwong, Panthita Ruang-areerate, Duangjai Sangsrakru, Chutima Sonthirod, Kittipat Ukoskit, Somvong Tragoonrung, Sithichoke Tangphatsornruang. 2015Functional and Integrative Genomics 153349-36210.1007/s10142-014-0423-yhttps://pubmed.ncbi.nlm.nih.gov/25504196/
29GenomicsGenome-wide SNP discovery and identification of QTL associated with agronomic traits in oil palm using genotyping-by-sequencing (GBS). Wirulda Pootakham, Nukoon Jomchai, Panthita Ruang-areerate, Jeremy R. Shearman, Chutima Sonthirod, Duangjai Sangsrakru, Somvong Tragoonrung and Sithichoke Tangphatsornruang 2015Genomics 105-288-29510.1016/j.ygeno.2015.02.002https://pubmed.ncbi.nlm.nih.gov/25702931/
30GenomicsDraft Genome Sequence of the Pathogenic Oomycete Pythium insidiosum Strain Pi-S, Isolated from a Patient with Pythiosis. Thidarat Rujirawat, Preecha Patumcharoenpol, Tassanee Lohnoo, Wanta Yingyong, Tassanee Lerksuthirat, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Laura Grenville-Briggs, Gagan Garg, Weerayuth Kittichotirat, and Theerapong Krajaejun 2015Genome Announcements 33e00574-1510.1128/genomeA.00574-15https://pubmed.ncbi.nlm.nih.gov/26089407/
31GenomicsInsights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi. Duangdao Wichdakul, Noppol Kobmoo, Supawadee Ingsriswang, Sithichoke Tangphatsornruang, Duriya Chantasigh, Janet Jennifer Luangsa-ard, Lily Eurwilaichitr 2015BMC Genomics 16-88110.1186/s12864-015-2101-4https://pubmed.ncbi.nlm.nih.gov/26511477/
32GenomicsComparative Analysis of Sugarcane Bagasse Metagenome Reveals Unique and Conserved Biomass-Degrading Enzymes among different Lignocellulolytic Microbial Communities. Wuttichai Mhuantong, Varodom Charoensawan, Pattanop Kanokratana, Sithichoke Tangphatsornruang and Verawat Champreda 2015Biotechnology for Biofuels 8-1610.1186/s13068-015-0200-8https://pubmed.ncbi.nlm.nih.gov/25709713/
33GenomicsSurvey of microbial diversity in flood areas during Thailand 2011 flood crisis using high-throughput tagged amplicon pyrosequencing. Wuttichai Mhuantong; Sarunyou Wongwilaiwalin; Thanaporn Laothanachareon; Lily Eurwilaichitr; Sithichoke Tangphatsornruang; Benjaporn Boonchayaanant; Tawan Limpiyakorn; Kobchai Pattaragulwanit; Thantip Punmatharith; John McEvoy; Eakalak Khan; Manaskorn Rachakornkij; Verawat Champreda 2015PLoS One 105e012804310.1371/journal.pone.0128043https://pubmed.ncbi.nlm.nih.gov/26020967/
34GenomicsConstruction of a high-density integrated genetic linkage map of rubber tree (Hevea brasiliensis) using genotyping-by-sequencing (GBS). Wirulda Pootakham, Panthita Ruang-areerate, Nukoon Jomchai, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Kanlaya Nirapathpongporn, Phayao Romruensukharom, Kanikar Theerawattanasuk, Somvong Tragoonrung and Sithichoke Tangphatsornruang 2015Frontiers in Plant Science 6-36710.3389/fpls.2015.00367https://pubmed.ncbi.nlm.nih.gov/26074933/
35GenomicsComparative study of bacterial communities in Nepenthes pitchers and their correlation to species and fluid acidity. Pattanop Kanokratana, Wuttichai Mhuanthong, Thanaporn Laothanachareon, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Shawn Meyes, Verawat Champreda.2016Microbial Ecology 722381-39310.1007/s00248-016-0798-5https://pubmed.ncbi.nlm.nih.gov/27287538/
36GenomicsACC oxidase and miRNA 159a, and their involvement in fresh fruit bunch yield (FFB) via sex ratio determination in oil palm.Suthasinee Somyong, Supannee Poopear, Supreet Sunner, Kitti Walayaporn, Nukoon Jomchai, Thippawan Yoocha, Kittipat Ukoskit, Sithichoke Tangphatsornruang, Somvong Tragoonrung 2016Molecular Genetics and Genomics 29131243-125710.1007/s00438-016-1181-4https://pubmed.ncbi.nlm.nih.gov/26897377/
37GenomicsEffects of methylation-sensitive enzymes on the enrichment of genic SNPs and the degree of genome complexity reduction in a two-enzyme genotyping-by-sequencing (GBS) approach: a case study in oil palm (Elaeis guineensis). Wirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Nukoon Jomchai, Duangjai Sangsrakru, Sithichoke Tangphatsornruang 2016Molecular Breeding --15410.1007/s11032-016-0572-xhttps://pubmed.ncbi.nlm.nih.gov/27942246/
38GenomicsIsolation of cellulolytic microcosms from bagasse compost in co-digested fibrous substrates. Sarunyou Wongwilaiwalin, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Pornpan Panichnumsin, Verawat Champreda, Chakrit Tachaapaikoon 2016Biomass Conversion and Biorefinery64421-42610.1007/s13399-016-0199-5-
39GenomicsComparative mitochondrial genome analysis of Pythium insidiosum and related Oomycete species provides new insights into genetic variation and phylogenetic relationships. Sithichoke Tangphatsornruang, Panthita Ruang-areerate, Duangjai Sangsrakru, Thidarat Rujirawat, Tassanee Lohnoo, Weerayuth Kittichotirat, Preecha Patumcharoenpol, Laura J. Grenville-Briggs, Theerapong Krajaejun 2016Gene 575134-4110.1016/j.gene.2015.08.036https://pubmed.ncbi.nlm.nih.gov/26299654/
40GenomicsEffect of freeze-thaw process on physical properties, microbial activities and population structures of anaerobic sludge. Sasikarn  Nuchdang, Maneerat Khemkhao, Wuttichai  Mhuantong, Sarunyou  Wongwilaiwalin, Sithichoke  Tangphatsornruang, Verawat  Champreda, Savitri  Vatanyoopaisarn, Chan Phalakornkule 2016Journal of Bioscience and Bioengineering 1234474-48110.1016/j.jbiosc.2016.11.005https://pubmed.ncbi.nlm.nih.gov/28007421/
41GenomicsPlasmid metagenomics reveals multiple antibiotic resistance gene classes among the gut microbiomes of hospitalised patients. Tossawan Jitwasinkul, Prapat Suriyaphol, Sithichoke Tangphatsornruang, Martin Asser Hansen, Lars Hestbjerg Hansen, Søren Johannes Sørensen, Chairat Permpikul, Yong Rongrungruang, Chanwit Tribuddharat 2016Journal of Global Antimicrobial Resistance 6-57-6610.1016/j.jgar.2016.03.001https://pubmed.ncbi.nlm.nih.gov/27530840/
42GenomicsThe two chromosomes of the mitochondrial genome of a sugarcane cultivar: assembly and recombination analysis using long PacBio reads. Jeremy R. Shearman, Chutima Sonthirod, Chaiwat Naktang, Wirulda Pootakham, Thippawan Yoocha, Duangjai Sangsrakru, Nukoon Jomchai, Somvong Tragoonrung, Sithichoke Tangphatsornruang 2016Scientific Reports --3153310.1038/srep31533https://pubmed.ncbi.nlm.nih.gov/27530092/
43GenomicsDe novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species. Wirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Panthita Ruang-Areerate, Thippawan Yoocha, Duangjai Sangsrakru, Kanikar Theerawattanask Ratchanee Rattanawong, Napawan Lekawipat and Sithichoke Tangphatsornruang 2017Scientific Reports7-41457 10.1038/srep41457https://pubmed.ncbi.nlm.nih.gov/28150702/
44GenomicsTargeted disruption of the polyketide synthase gene pks15 affects virulence against insects and phagocytic survival in the fungus Beauveria bassiana. Wachiraporn  Toopaang, Suranat  Phonghanpot, Juntira  Punya, Cheerapha  Panyasiri, Kewarin Klamchao, Rudsamee  Wasuwan, Chettida  Srisuksam, Duangjai Sangsrakru, Chutima Sonthirod, Sithichoke Tangphatsornruang, Morakot  Tanticharoen, Alongkorn Amnuaykanjanasin 2017Fungal Biology 1218664-67510.1016/j.funbio.2017.04.007https://pubmed.ncbi.nlm.nih.gov/28705395/
45GenomicsGenome-wide association mapping of latex yield and girth in Amazonian accessions of Hevea brasiliensis grown in a suboptimal climate zone. Vipavee Chanroj, Ratchanee Rattanawong, Thitaporn Phumichai, Sithichoke Tangphatsornruang, Kittipat Ukoskit 2017Genomics 1095-6475-48410.1016/j.ygeno.2017.07.005https://pubmed.ncbi.nlm.nih.gov/28751185/
46GenomicsHigh resolution profiling of coral-associated bacterial communities using full-length 16S rRNA sequence data from PacBio SMRT sequencing system. Wirulda Pootakham, Wutthichai Mhuantong, Thippawan Yoocha, Lalita Putchim, Chutima Sonthirod, Chaiwat Naktang, Nalinee Thongtham, and Sithichoke Tangphatsornruang 2017Scientific Reports --277410.1038/s41598-017-03139-4https://pubmed.ncbi.nlm.nih.gov/28584301/
47GenomicsBrown rice and retrograded brown rice alleviate inflammatory response in dextran sulfate sodium (DSS)-induced colitis mice. Kemika Praengam, Yuraporn Sahasakul, Piengchai Kupradinun, Siriwan Sakarin, Wanwisa Sanitchua, Anudep Rungsipipat, Kasem Rattanapinyopituk, Pornpimon Angkasekwinai, Khaimuk Changsri, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, and Siriporn Tuntipopipat 2017Food & Function 8124630-464310.1039/c7fo00305fhttps://pubmed.ncbi.nlm.nih.gov/29147700/
48GenomicsMicrobial communities in the reef water at Kham Island, lower Gulf of Thailand. Naraporn Somboonna, Alisa Wilantho, Somchai Monanunsap, Suchana Chavanich, Sithichoke Tangphatsornruang, Sissades Tongsima. 2017PeerJ5-e362510.7717/peerj.3625https://pubmed.ncbi.nlm.nih.gov/28828243/
49GenomicsDynamics of coral-associated microbiomes during a thermal bleaching event. Wirulda Pootakham, Wuttichai Mhuantong, Lalita Putchim, Thippawan Yoocha, Chutima Sonthirod, Wasitthee Kongkachana, Duangjai Sangsrakru, Chaiwat Naktang, Nukoon Jomchai, Nalinee Thongtham and Sithichoke Tangphatsornruang 2018MicrobiologyOpen 75e0060410.1002/mbo3.604https://pubmed.ncbi.nlm.nih.gov/29573244/
50GenomicsCharacterization of cellulolytic microbial consortium enriched on Napier grass using metagenomic approaches. Pattanop Kanokratana, Sarunyou Wongwilaiwalin, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, and Verawat Champreda 2018Journal of bioscience and bioengineering1254439-44710.1016/j.jbiosc.2017.10.014https://pubmed.ncbi.nlm.nih.gov/29169786/
51GenomicsProbing the Phylogenomics and Putative Pathogenicity Genes of Pythium insidiosum by Oomycete Genome Analyses. Thidarat Rujirawat, Preecha Patumcharoenpol, Tassanee Lohnoo, Wanta Yingyong, Yothin Kumsang, Penpan Payattikul, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Onrapak Reamtong, Gagan Garg, Weerayuth Kittichotirat and Theerapong Krajaejun 2018Scientific Reports --413510.1038/s41598-018-22540-1https://pubmed.ncbi.nlm.nih.gov/29515152/
52GenomicsStructural and metabolic adaptation of cellulolytic microcosm in co-digested Napier grass-swine manure and its application in enhancing thermophilic biogas production. Sarunyou Wongwilaiwalin, Wuttichai Mhuantong, Verawat Champreda, Sithichoke Tangphatsornruang, Pornpan Panichnumsin, Khanok Ratanakhan okchai and Chakrit Tachaapaikoon 2018Royal Scoiety of Chemistry Advances --29806-2981510.1039/c8ra05616ahttps://pubmed.ncbi.nlm.nih.gov/35547297/
53GenomicsBacterial Diversity and Phylogenetic Analysis of Type II Polyketide Synthase Gene from Manao-Pee Cave, Thailand. Apirak Wiseschart, Wuttichai Mhuanthong, Pattamaporn Thongkam, Sithichoke Tangphatsornruang, Duriya Chantasingh, Kusol Pootanakit 2018Geomicrobiology Journal 356518-52710.1080/01490451.2017.1411993-
54GenomicsIdentifying a DELLA gene as a height controlling gene in oil palm. Suthasinee Somyong, Kitti Walayaporn, Nukoon Jomchai, Siti Hajar Hassan, Tanapong Yodyingyong, Chalermpol Phumichai, Anek Limsrivilai, Arthorn Saklang, Sudprasong Suvanalert, Chutima Sonthirod, Laurensia Danis Anggradita, Sithichoke Tangphatsornruang 2019Chiang Mai Journal of Science46132-45--
55GenomicsDynamics of biogenic amines and bacterial communities in a Thai fermented pork product Nham. Pannita Santiyanont, Kanittha Chantarasakha, Preenapha Tepkasikul, Yanee Srimarut, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Young-Gun Zo, Nipa Chokesajjawatee 2019Food Research International 119-110-11810.1016/j.foodres.2019.01.060https://pubmed.ncbi.nlm.nih.gov/30884638/
56GenomicsGenome-wide association mapping of virulence gene in rice blast fungus Magnaporthe oryzae using a genotyping by sequencing approach. Siripar Korinsak, Chatchawan Jantrasuriyarat, Wirulda Pootakham, Sujin patarapuwadol, Sithichoke Tangphatsornruang, Samart Wanchana, Apichart Vanavichit, Anucha Plabpla and Theerayut Toojinda 2019Genomics 1114661-66810.1016/j.ygeno.2018.05.011https://pubmed.ncbi.nlm.nih.gov/29775784/
57GenomicsComplete Genome Sequences of Four Serotypes of Dengue Virus Prototype Continuously Maintained in the Laboratory. Kwanrutai Chin-inmanu, Aroonroong Suttitheptumrong, Duangjai Sangsrakru , Dumrong Mairiang, Sithichoke Tangphatsornruang, Prida Malasit, Prapat Suriyaphol 2019Microbiology Resource Announcements 819e00199-1910.1128/MRA.00199-19https://pubmed.ncbi.nlm.nih.gov/31072897/
58GenomicsShotgun metagenomic sequencing from Manao-Pee cave, Thailand, reveals insight into the microbial community structure and its metabolic potential. Apirak Wiseschart, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Duriya Chantasingh, Kusol Pootanakit 2019BMC Microbiology19114410.1186/s12866-019-1521-8https://pubmed.ncbi.nlm.nih.gov/31248378/
59GenomicsComparative analysis of bacterial communities associated with healthy and diseased corals in the Indonesian sea. Wuttichai Mhuantong, Handung Nuryadi, Agus Trianto, Agus Sabdono, Sithichoke Tangphatsornruang, Lily Eurwilaichitr, Pattanop Kanokratana, Verawat Champreda 2019PeerJ 7-e813710.7717/peerj.8137https://pubmed.ncbi.nlm.nih.gov/31875145/
60GenomicsA Growth Regulating Factor (EgGRF1) Associated with Height in Oil Palm. Suthasinee Somyong, Laurensia Danis Anggradita, Kitti Walayaporn, Nukoon Jomchai, Chutima Sonthirod, Sithichoke Tangphatsornruang 2020Chiang Mai Journal of Science 473418-430--
61GenomicsOptimization of high molecular weight DNA extraction methods in shrimp for a long-read sequencing platform. Pacharaporn Angthong, Tanaporn Uengwetwanit, Wirulda Pootakham, Kanchana Sittikankaew, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Intawat Nookaew, Thidathip Wongsurawat, Piroon Jenjaroenpun, Wanilada Rungrassamee, Nitsara Karoonuthaisiri 2020Peer J 8-e10340 10.7717/peerj.10340https://pubmed.ncbi.nlm.nih.gov/33240651/
62GenomicsThe BPM 24 Rubber Tree Genome, Organellar Genomes and Synteny within the Family Euphorbiaceae. Jeremy Shearman, Wirulda Pootakham, Sithichoke Tangphatsornruang. 2020In Compendium of Plant Genomes: The Rubber Genome (Springer International Publishing)--67-7910.1007/978-3-030-42258-5_4-
63GenomicsDevelopment of Molecular Markers in Hevea brasiliensis for Marker-assisted Breeding. Wirulda Pootakham, Jeremy Shearman, Sithichoke Tangphatsornruang. 2020In Compendium of Plant Genomes: The Rubber Genome (Springer International Publishing) --55-6610.1007/978-3-030-42258-5_5-
64GenomicsChloroplast genome data of Luffa acutangula and Luffa aegyptiaca and their phylogenetic relationships. Chutintorn Yundaeng, Wanapinun Nawae, Chaiwat Naktang, Jeremy R Shearman, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Nukoon Jomchai, John R Sheedy, Supat Mekiyanon, Methawat Tuntaisong, Wirulda Pootakham, Sithichoke Tangphatsornruang 2020Data in Brief 33-10647010.1016/j.dib.2020.106470https://pubmed.ncbi.nlm.nih.gov/33195780/
65GenomicsCharacterization of centromeric satellite DNAs (MALREP) in the Asian swamp eel (Monopterus albus) suggests the possible origin of repeats from transposable elementsSuntronpong A, Singchat W, Kruasuwan W, Prakhongcheep O, Sillapaprayoon S, Muangmai N, Somyong S, Indanada C, Kraichak E, Peyachoknagul S, Srikulnath K 2020Genomics 11253097-310710.1016/j.ygeno.2020.05.024https://pubmed.ncbi.nlm.nih.gov/32470643/
66GenomicsAssembly of the durian chloroplast genome using long PacBio reads. Jeremy R Shearman, Chutima Sonthirod, Chaiwat Naktang, Duangjai Sangsrakru, Thippawan Yoocha, Ratchanee Chatbanyong, Siriporn Vorakuldumrongchai, Orwintinee Chusri, Sithichoke Tangphatsornruang, Wirulda Pootakham 2020Scientific Reports 10-1598010.1038/s41598-020-73549-4https://pubmed.ncbi.nlm.nih.gov/33028920/
67GenomicsThe complete mitochondrial genome of Luffa acutangula. Panthita Ruang-areerate , Jeremy Shearman , Wasitthee Kongkachana , Nukoon Jomchai , Thippawan Yoocha , Sonicha U-thoomporn , Nattapol Narong , John Robert Sheedy, Supat Mekiyanon , Wirulda Pootakham and Sithichoke Tangphatsornruang 2020Mitochondrial DNA Part B533226-322710.1080/23802359.2020.1810165https://pubmed.ncbi.nlm.nih.gov/33458114/
68GenomicsSpecial issue on the dissection of quantitative trait loci in a chromosome segment substitution line population of rice.Jeremy R Shearman2020Genomics10.1016/j.ygeno.2020.06.023https://pubmed.ncbi.nlm.nih.gov/32624315/
69GenomicsDe novo chromosome-level assembly of the Centella asiatica genomeWirulda Pootakham , Chaiwat Naktang , Wasitthee Kongkachana , Chutima Sonthirod , Thippawan Yoocha , Duangjai Sangsrakru , Nukoon Jomchai , Sonicha U-Thoomporn , Kanokwan Romyanon , Theerayut Toojinda , Sithichoke Tangphatsornruang 2021Genomics11342221-222810.1016/j.ygeno.2021.05.019https://pubmed.ncbi.nlm.nih.gov/34022344/
70GenomicsTaxonomic profiling of Symbiodiniaceae and bacterial communities associated with Indo-Pacific corals in the Gulf of Thailand using PacBio sequencing of full-length ITS and 16S rRNA genesWirulda Pootakham , Wuttichai Mhuantong , Thippawan Yoocha , Duangjai Sangsrakru , Wasitthee Kongkachana , Chutima Sonthirod , Chaiwat Naktang , Nukoon Jomchai , Sonicha U-Thoomporn , Thammasak Yeemin , Sittiporn Pengsakun , Makamas Sutthacheep , Sithichoke Tangphatsornruang 2021Genomics113-2717-272910.1016/j.ygeno.2021.06.001https://pubmed.ncbi.nlm.nih.gov/34089786/
71GenomicsA chromosome-scale assembly of the black tiger shrimp (Penaeus monodon) genome facilitates the identification of growth-associated genesTanaporn Uengwetwanit , Wirulda Pootakham , Intawat Nookaew , Chutima Sonthirod , Pacharaporn Angthong , Kanchana Sittikankaew , Wanilada Rungrassamee , Sopacha Arayamethakorn , Thidathip Wongsurawat , Piroon Jenjaroenpun , Duangjai Sangsrakru , Rungnapa Leelatanawit , Jutatip Khudet , Jasper J Koehorst , Peter J Schaap , Vitor Martins Dos Santos , Frédéric Tangy , Nitsara Karoonuthaisiri 2021Molecular Ecology Resources 2151620-164010.1111/1755-0998.13357https://pubmed.ncbi.nlm.nih.gov/33586292/
72GenomicsDe novo Assembly of the Brain Coral Platygyra sinensis GenomeWirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Narinratana Kongjandtre, Lalita Putchim, Duangjai Sangsrakru, Thippawan Yoocha and Sithichoke Tangphatsornruang2021Front. Mar. Sci8-73265010.3389/fmars.2021.732650-
73GenomicsThe integrative taxonomy of Beauveria asiatica and B. bassiana species complexes with whole-genome sequencing, morphometric and chemical analysesNoppol Kobmoo, Nuntanat Arnamnart, Wirulda Pootakham, Chutima Sonthirod, Artit Khonsanit, Wilawan Kuephadungphan, Rinrada Suntivich, Tatiana E Giraud, Janet Jennifer Luangsa-Ard2021Persoonia-Molecular Phylogeny and Evolution of Fungi471136-15010.3767/persoonia.2021.47.04-
74GenomicsSNP Variants of DELLA and Growth Regulating Factor Genes are Potentially Involved in Height in Coconut.Kitti Walayaporn, Chutima Sonthirod, Wasitthee Kongkachana, Phakamas Phetchawang, Duangjai Sangsrakru, Nukoon Jomchai, Wirulda Pootakham, Sithichoke Tangphatsornruang, Tippaya Kraitong, Apichart Vanavichit and Suthasinee Somyong2021Chiang Mai Journal of Science 4851271-1286--
75GenomicsGenetic loci regulating cadmium content in rice grains. Gareth J. Norton, Anthony Travis, Panthita Ruang-areerate, Graeme W. Nicol, Ayotunde A. Adeosun, Mahmud Hossain, M. Rafiq Islam, Alex Douglas and Adam H. Price 2021Euphytica 21733510.1007/s10681-020-02752-1https://pubmed.ncbi.nlm.nih.gov/33627887/
76GenomicsNanopore sequencing in agricultural and food applications. Jeremy R Shearman and Sithichoke Tangphatsornruang 2021In Handbook of Nanotechnology Applications (Elsevier) --443-45910.1016/B978-0-12-821506-7.00018-1-
77GenomicsCandidate gene association of gene expression data in sugarcane contrasting for sucrose content. Supaporn Khanbo, Sithichoke Tangphatsornruang, Jittima Piriyapongsa, Warodom Wirojsirasak, Prapat Punpee, Peeraya Klomsa-ard and Kittipat Ukoskit 2021Genomics 1131229-23710.1016/j.ygeno.2020.12.014https://pubmed.ncbi.nlm.nih.gov/33321201/
78GenomicsIron homeostasis in the absence of ferricrocin and its consequences in fungal development and insect virulence in Beauveria bassiana. Alongkorn Amnuaykanjanasin, Jiraporn Jirakkakul, Nuchnadda Wichienchote, Somsak Likhitrattanapisal, Supawadee Ingsriswang, Thippawan Yoocha, Sithichoke Tangphatsornruang, Rudsamee Wasuwan, Supapon Cheevadhanarak, Morakot Tanticharoen 2021Scientific Reports1111962410.1038/s41598-021-99030-4.https://pubmed.ncbi.nlm.nih.gov/34608174/
79GenomicsThe complete mitochondrial genome sequence of the mountain crab Indochinamon bhumibol. Chaiwat Naktang, Chutima Sonthirod, Duangjai Sangsrakru, Sonicha U-thoomporn, Thavarit Koipokaisawan, Paiboon Panase, Methawat Tuntaisong, Wirulda Pootakham and Sithichoke Tangphatsornruang 2021Mitochondrial DNA Part B62634-63510.1080/23802359.2021.1877203https://pubmed.ncbi.nlm.nih.gov/33644395/
80GenomicsDe novo assemblies of Luffa acutangula and Luffa cylindrica genomes reveal an expansion associated with substantial accumulation of transposable elements. Wirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Wanapinun Nawae, Thippawan Yoocha, Wasitthee Kongkachana, Duangjai Sangsrakru, Nukoon Jomchai, Sonicha U-thoomporn, John R. Sheedy, Jarunee Buaboocha, Supat Mekiyanon, Sithichoke Tangphatsornruang 2021Molecular Ecology Resources 211212-22510.1111/1755-0998.13240https://pubmed.ncbi.nlm.nih.gov/32841550/
81GenomicsA chromosome-scale assembly of the black gram (Vigna mungo) genome. Wirulda Pootakham, Wanapinun Nawae, Chaiwat Naktang, Chutima Sonthirod, Thippawan Yoocha, Wasitthee Kongkachana, Duangjai Sangsrakru, Nukoon Jomchai, Sonicha Uthoomporn, Prakit Somta, Kularb Laosastit, Sithichoke Tangphatsornruang 2021Molecular Ecology Resources 211238-25010.1111/1755-0998.13243https://pubmed.ncbi.nlm.nih.gov/32794377/
82GenomicsMetagenomics of antimicrobial and heavy metal resistance in the cecal microbiome of fattening pigs raised without antibioticsPaiboon Tunsagool, Wuttichai Mhuantong, Sithichoke Tangphatsornruang, Nutthee Am-in, Rungtip Chuanchuen, Taradon Luangtongkum, and Gunnaporn Suriyaphol 2021Appl Environ Microbiol878e02684-20.10.1128/AEM.02684-20.https://pubmed.ncbi.nlm.nih.gov/33547058/
83GenomicsGenetic diversity of the dengue virus population in dengue fever and dengue hemorrhagic fever patients. Kwanrutai Chin-inmanu, Dumrong Mairiang, Phongphak Khongthon, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Nattaya Tangthawornchaikul, Prida Malasit and Prapat Suriyaphol 2021Asian Pacific Journal of Allergy and Immunology ---10.12932/AP-230620-0887https://pubmed.ncbi.nlm.nih.gov/33386790/
84GenomicsEstablishment of human-induced pluripotent stem cell-derived neurons - a promising in vitro model for a molecular study of rabies virus and host interactionThanathom Chailangkarn, Nathiphat Tanwattana, Thanakorn Jaemthaworn, Sira Sriswasdi, Nanchaya Wanasen, Sithichoke Tangphatsornruang, Kantinan Leetanasaksakul, Yuparat Jantraphakorn, Wanapinun Nawae, Boonlert Lumlertdacha, Penpicha Chankeeree, Porntippa Lekcharoensuk, Challika Kaewborisuth 2021International Journal of Molecular Sciences22211198610.3390/ijms222111986.https://pubmed.ncbi.nlm.nih.gov/34769416/
85GenomicsThe fungus Metarhizium sp. BCC 4849 is an effective and safe mycoinsecticide for the management of several insect pestsRudsamee Wasuwan, Natnapha Phosrithong, Boonhiang Promdonkoy, Duangjai Sangsrakru, Chutima Sonthirod, Sithichoke Tangphatsornruang, Somsak Likhitrattanapisal, Supawadee Ingsriswang, Chettida Srisuksam, Kewarin Klamchao, Malinee Suksangpanomrung, Thipmanee Hleepongpanich, Sareeya Reungpatthanaphong, Morakot Tanticharoen, Alongkorn Amnuaykanjanasin 2021Insects1314210.3390/insects13010042.https://pubmed.ncbi.nlm.nih.gov/35055885/
86GenomicsIdentification of candidate gene-based markers for girth growth in rubber trees. Gunlayarat Bhusudsawang, Ratchanee Rattanawong, Thitaporn Phumichai, Wirulda Pootakham, Sithichoke Tangphatsornruang, Kittipat Ukoskit 2021Plants107114010.3390/plants10071440https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8309273/
87GenomicsComplete chloroplast genome sequences of five Bruguiera species (Rhizophoraceae): comparative analysis and phylogenetic relationships.Panthita Ruang-areerate, Wasitthee Kongkachana, Chaiwat Naktang, Chutima Sonthirod, Nattapol Narong, Nukoon Jomchai, Pasin Maprasop, Chatree Maknual, Nawin Phormsin, Jeremy R Shearman, Wirulda Pootakham, Sithichoke Tangphatsornruang2021PeerJ9e1226810.7717/peerj.12268https://pubmed.ncbi.nlm.nih.gov/34733586/
88GenomicsGenetic control of root architectural traits in KDML105 chromosome segment substitution lines under well-watered and drought stress conditionsMathurada Ruangsiri, Phanchita Vejchasarn, Patompong Saengwilai, Jonathan Lynch, Malcolm J. Bennett, Kathleen M. Brown, Cattleya Chutteang, Ratri Boonruangrod, Jeremy Shearman, Theerayut Toojinda & Jonaliza L. Siangliw2021Plant Production Science--1-1810.1080/1343943X.2021.1883990-
89GenomicsPopulation Structure of Nation-Wide Rice in ThailandPhanchita Vejchasarn, Jeremy R. Shearman, Usawadee Chaiprom, Yotwarit Phansenee, Arissara Suthanthangjai, Jirapong Jairin, Varapong Chamarerk, Tatpong Tulyananda & Chainarong Amornbunchornvej2021Rice14-8810.1186/s12284-021-00528-2-
90GenomicsChromosome-level genome assembly of Indian mangrove (Ceriops tagal) revealed a genome-wide duplication event predating the divergence of Rhizophoraceae mangrove species.Wirulda Pootakham,Chaiwat Naktang,Chutima Sonthirod,Wasitthee Kongkachana,Nattapol Narong,Duangjai Sangsrakru,Chatree Maknual,Darunee Jiumjamrassil,Pranom Chumriang,Sithichoke Tangphatsornruang2022Plant Genome--e2021710.1002/tpg2.20217https://pubmed.ncbi.nlm.nih.gov/35608212/
91GenomicsThe complete mitochondrial genome of the Hipposideros pendleburyi (Pendlebury's leaf-nosed bat) an endemic species in ThailandWasitthee Kongkachana,Chaiwat Naktang,Duangjai Sangsrakru,Nukoon Jomchai,Phuset Yingyong,Wirulda Pootakham,Sithichoke Tangphatsornruang &Pipat Soisook2022Mitochondrial DNA Part B 7117-1810.1080/23802359.2021.2005493https://pubmed.ncbi.nlm.nih.gov/34926820/
92GenomicsThe complete mitogenome of the Thai soldier crab Mictyris thailandensis Davie, Wisespongpand & Shih, 2013 (Crustacea: Decapoda: Mictyridae)Chutima Sonthirod , Sonicha U-Thoomporn , Chaiwat Naktang , Wirulda Pootakham , Sithichoke Tangphatsornruang , Rueangrit Promdam , Aekkaraj Nualla-Ong , Supattra Pongparadon2022Mitochondrial DNA Part B 71300-30210.1080/23802359.2021.2024770https://pubmed.ncbi.nlm.nih.gov/35111942/
93GenomicsThe complete mitochondrial genome sequence of the karst-dwelling crab, Terrapotamon thungwa (Crustacea: Brachyura: Potamidae)Chutintorn Yundaeng , Chaiwat Naktang , Sonicha U-Thoomporn , Nattapol Narong , Phakamas Phetchawang , Wirulda Pootakham , Rueangrit Promdam , Sithichoke Tangphatsornruang2022Mitochondrial DNA Part B75769-77110.1080/23802359.2022.2070038https://pubmed.ncbi.nlm.nih.gov/35558177/
94GenomicsA de novo reference assembly of the yellow mangrove Ceriops zippeliana genomeWirulda Pootakham, Chutima Sonthirod, Chaiwat Naktang, Wasitthee Kongkachana, Sonicha U-thoomporn, Phakamas Phetchawang, Chatree Maknual, Darunee Jiumjamrassil, Tamanai Pravinvongvuthi, Sithichoke Tangphatsornruang2022G3: Genes, Genomes, Genetics 124jkac02510.1093/g3journal/jkac025https://pubmed.ncbi.nlm.nih.gov/35106563/
95GenomicsDe Novo Reference Assembly of the Upriver Orange Mangrove (Bruguiera sexangula) GenomeWirulda Pootakham, Chaiwat Naktang, Chutima Sonthirod, Wasitthee Kongkachana, Thippawan Yoocha, Nukoon Jomchai, Chatree Maknual, Pranom Chumriang, Tamanai Pravinvongvuthi, Sithichoke Tangphatsornruang2022Genome Biology and Evolution142evac02510.1093/gbe/evac025https://pubmed.ncbi.nlm.nih.gov/35148390/
96GenomicsA chromosome-scale reference genome assembly of yellow mangrove (Bruguiera parviflora) reveals a whole genome duplication event associated with the Rhizophoraceae lineageWirulda Pootakham,Chutima Sonthirod,Chaiwat Naktang,Wasitthee Kongkachana,Duangjai Sangsrakru,Sonicha U-thoomporn,Chatree Maknual,Wijarn Meepol,Waratthaya Promchoo,Pasin Maprasop,Nawin Phormsin,Sithichoke Tangphatsornruang2022Molecular Ecology Resources 2251939-195310.1111/1755-0998.13587https://pubmed.ncbi.nlm.nih.gov/35060320/
97GenomicsA SNP variation in an expansin (EgExp4) gene affects height in oil palmSuthasinee Somyong , Phakamas Phetchawang , Abdulloh Kafa Bihi , Chutima Sonthirod , Wasitthee Kongkachana , Duangjai Sangsrakru , Nukoon Jomchai , Wirulda Pootakham , Sithichoke Tangphatsornruang2022PeerJ 10-e1304610.7717/peerj.13046https://pubmed.ncbi.nlm.nih.gov/35313525/
98GenomicsRice height QTLs in KDML105 chromosome segment substitution lines.Jeremy R. Shearman, Phanchita Vejchasarn, Chaiwat Naktang, Yotwarit Phansenee, Nukoon Jomchai, Jonaliza Lanceras-Siangliw, Sithichoke Tangphatsornruang and Theerayut Toojinda 2022Genomics1141482-48710.1016/j.ygeno.2019.09.003https://pubmed.ncbi.nlm.nih.gov/31499174/
99GenomicsAssembly of a hybrid mangrove, Bruguiera hainesii, and its two ancestral contributors, Bruguiera cylindrica and Bruguiera gymnorhiza.Jeremy R Shearman, Chaiwat Naktang, Chutima Sonthirod, Wasitthee Kongkachana, Sonicha U-Thoomporn, Nukoon Jomchai, Chatree Maknual, Suchart Yamprasai, Waratthaya Promchoo, Panthita Ruang-Areerate, Wirulda Pootakham, Sithichoke Tangphatsornruang2022Genomics114311038210.1016/j.ygeno.2022.110382https://pubmed.ncbi.nlm.nih.gov/35526741/
100GenomicsDistance-based paper device using combined SYBP safe and gold nanoparticle probe LAMP assay to detect Leishmania among patients with HIV.Toon Ruang-areerate, Natkrittaya Saengsawang , Panthita Ruang-areerate, Nalin Ratnarathorn, Thanyapit Thita, Saovanee Leelayoova, Suradej Siripattanapipong, Kiattawee Choowongkomon, Wijitar Dungchai2022Scientific Reports121455810.1038/s41598-022-18765-whttps://pubmed.ncbi.nlm.nih.gov/36028548/
101GenomicsComparative analysis and phylogenetic relationships of Ceriops species (Rhizophoraceae) and Avicennia lanata (Acanthaceae): Insight into the chloroplast genome evolution between middle and seaward zones of mangrove forests.Panthita Ruang-areerate, Thippawan Yoocha, Wasitthee Kongkachana, Phakamas Phetchawang, Chatree Maknual, Wijarn Meepol, Darunee Jiumjamrassil, Wirulda Pootakham, Sithichoke Tangphatsornruang2022Biology11338310.3390/biology11030383https://pubmed.ncbi.nlm.nih.gov/35336757/
102GenomicsThe First Genetic Linkage Map of Winged Bean (Psophocarpus tetragonolobus (L.) DC.) and QTL Mapping for Flower-, Pod-, and Seed-related TraitsSompong Chankaew, Sasiprapa Sriwichai, Teppratan Rakvong, Tidarat Monkham, Jirawat Sanitchon, Sithichoke Tangphatsornruang, Wasitthee Kongkachana, Chutima Sonthirod, Wirulda Pootakham, Kitiya Amkl, Anochar Kaewwongwal, Kularb Laosatit, Prakit Somta 2022Plants11450010.3390/plants11040500.https://pubmed.ncbi.nlm.nih.gov/35214834/
103MetabolomicsSimultaneous saccharification and viscosity reduction of cassava pulp using a multi-component starch and cell-wall degrading enzyme for bioethanol production.Aphisit Poonsrisawat, Atchara Paemanee, Sittichoke Wanlapatit, Kuakoon Piyachomkwan, Lily Eurwilaichitr, Verawat Champreda20173Biotech751-1010.1007/s13205-017-0924-1https://pubmed.ncbi.nlm.nih.gov/28868217/
104MetabolomicsSynergistic effects of cell wall degrading enzymes on rheology of cassava root mash.Aphisit Poonsrisawat, Sittichoke Wanlapatit, Rungtiva Wansuksri, Kuakoon Piyachomkwan, Atchara Paemanee, Chaiwut Gamonpilas, Lily Eurwilaichitr, Verawat Champreda2017Process Biochemistry51122104-211110.1016/j.procbio.2016.09.010-
105MetabolomicsNevirapine induced mitochondrial dysfunction in HepG2 cells.Atchara Paemanee, Wannapa Sornjai, Suthathip Kittisenachai, Naraporn Sirinonthanawech, Sittiruk Roytrakul, Jeerang Wongtrakul, Duncan R Smith2017Scientific Reports711-1110.1038/s41598-017-09321-yhttps://pubmed.ncbi.nlm.nih.gov/28835669/
106MetabolomicsScreening of melatonin, a-tocopherol, folic acid, acetyl-L-carnitine and resveratrol for anti-dengue 2 virus activity.Atchara Paemanee, Atitaya Hitakarun, Sittiruk Roytrakul, Duncan R Smith2018BMC Research Notes1111-710.1186/s13104-018-3417-3https://pubmed.ncbi.nlm.nih.gov/29769094/
107MetabolomicsNevirapine induces apoptosis in liver (HepG2) cells.Jeerang Wongtrakul, Atchara Paemanee, Phitchayapak Wintachai, Chutima Thepparit, Sittiruk Roytrakul, Thananya Thongtan, Kanokwan Janphen, Khuanchai Supparatpinyo, Duncan R Smith2019Asian Pacific Journal of Tropical Medicine96100-10910.1016/j.apjtm.2016.04.015https://pubmed.ncbi.nlm.nih.gov/27262065/
108MetabolomicsNovel bioactive peptides demonstrating anti-dengue virus activity isolated from the Asian medicinal plant Acacia catechu.Aussara Panya, Petlada Yongpitakwattana, Prapaphan Budchart, Nunghathai Sawasdee, Sucheewin Krobthong, Atchara Paemanee, Sittiruk Roytrakul, Siriluk Rattanabunyong, Kiattawee Choowongkomon, Pa‐thai Yenchitsomanus2019Chemical Biology and Drug Design932100-10910.1111/cbdd.13400https://pubmed.ncbi.nlm.nih.gov/30225997/
109MetabolomicsAndrographolide and Its 14-Aryloxy analogues inhibit zika and dengue virus infection.Feng Li, Wipaporn Khanom, Xia Sun, Atchara Paemanee, Sittiruk Roytrakul, Decai Wang, Duncan R Smith, Guo-Chun Zhou2020Molecules2521503710.3390/molecules25215037https://pubmed.ncbi.nlm.nih.gov/33143016/
110MetabolomicsCarboxylic Acid Reductase Can Catalyze Ester Synthesis in Aqueous Environments.Pornkanok Pongpamorn, Cholpisit Kiattisewee, Narongyot Kittipanukul, Juthamas Jaroensuk, Duangthip Trisrivirat, Somchart Maenpuen, and Pimchai Chaiyen2021Angewandte Chemie133-5813-581710.1002/pca.3119https://pubmed.ncbi.nlm.nih.gov/33247515/
111MetabolomicsCaspase-3, a shrimp phosphorylated hemocytic protein is necessary to control YHV infectionHavanapan PO, Taengchaiyaphum S, Paemanee A, Phungthanom N, Roytrakul S, Sritunyalucksana K, Krittanai C2021Fish & Shellfish Immunology114-36-4810.1016/j.fsi.2021.04.007https://pubmed.ncbi.nlm.nih.gov/33864947/
112MetabolomicsBlack rice cultivar from Java Island of Indonesia revealed genomic, proteomic and anthocyanin nutritional value.Dewi Ratih Tirto Sari, Atchara Paemanee, Sittiruk Roytrakul, James Robert Ketudat Cairns, Anna Safitri, Fatchiyah Fatchiyah2021Acta Bioichimica Polonica --2020-538610.18388/abp.2020_5386https://pubmed.ncbi.nlm.nih.gov/33676377/
113MetabolomicsQuantitative analysis of methoxyflavones discriminates between the two types of Kaempferia parvifloraJaruwan Joothamongkhon,Ploypailin Susantikarn,Wasitthee Kongkachana,Yanisa Ketngamkum,Sornsawan Batthong,Nukoon Jomchai,Phuset Yingyong,Udom Asawapirom,Sithichoke Tangphatsornruang,Atchara Paemanee,Pornkanok Pongpamorn2022Phytochemical Analysis33-670-67710.1002/pca.3119. Epub 2022 Mar 18https://pubmed.ncbi.nlm.nih.gov/35303761/
114MetabolomicsMass spectrometry and synchrotron‐FTIR microspectroscopy reveal the anti‐inflammatory activity of Bua Bok extracts.Paemanee, A, Rattanabunyong, S, Ketngamkum, Y, Siriwaseree, J, Pongpamorn, P, Romyanon, K, Tangphatsornruang, S, Kuaprasert, B, Choowongkomon, K2022Phytochemical Analysisxx-1-1310.1002/pca.3161https://pubmed.ncbi.nlm.nih.gov/35790045/
115MetabolomicsBiophysical Characterization of Novel DNA Aptamers against K103N/Y181C Double Mutant HIV-1 Reverse Transcriptase.Ratanabunyong, S, Seetaha, S, Hannongbua, S, Yanaka, S, Yagi-Utsumi, M, Kato, K, Paemanee A, Choowongkomon, K2022Molecules272851-1410.3390/molecules27010285 https://pubmed.ncbi.nlm.nih.gov/35011517/
116ProteomicsComparative proteomic analysis of Chamydomonas reinhardtii control and a salinity-tolerant strain revealed a differential protein expression pattern. Sayamon Sithtisarn, Kittisak Yokthongwattana, Bancha Mahong, Sittiruk Roytrakul, Atchara Paemanee, Narumon Phaonakrop, Chotika Yokthongwattana 2017Planta 2465843-85610.1007/s00425-017-2734-4https://pubmed.ncbi.nlm.nih.gov/28688014/
117ProteomicsThe significance of proline and glutamate on butanol chaotropic stress in Bacillus subtilis 168. Gumpanat Mahipant, Atchara Paemanee, Sittiruk Roytrakul, Junichi Kato, Alisa S Vangnai2017Biotechnology for Biofuels 1011-1410.1186/s13068-017-0811-3https://pubmed.ncbi.nlm.nih.gov/28503197/
118ProteomicsInterferon gamma induces cellular protein alteration and increases replication of porcine circovirus type 2 in PK-15 cells. Pattama Mutthi, Sirin Theerawatanasirikul, Sittiruk Roytrakul, Atchara Paemanee, Chalermpol Lekcharoensuk, Payuda Hansoongnern, Nantawan Petcharat, Nattarat Thangthamniyom, Porntippa Lekcharoensuk2018Archives of Virology 163112947-295710.1007/s00705-018-3944-1https://pubmed.ncbi.nlm.nih.gov/30039317/
119ProteomicsIdentification and characterization of glycoproteins during oil palm somatic embryogenesis. Suvichark Aroonluk, Sittiruk Roytrakul, Yodying Yingchutrakul, Suthathip Kittisenachai, Chatchawan Jantasuriyarat2018Agriculture and Natural Resources52-430-43810.1016/j.anres.2018.11.011-
120ProteomicsHeterologous expression and antimicrobial activity of OsGASR3 from rice (Oryza sativa L.).Krissana Boonpa, Supaluk Tantong, Kamonwan Weerawanich, Pawinee Panpetch, Onanong Pringsulaka, Yodying Yingchutrakul, Sittiruk Roytrakul, Supaart Sirikantarama2018Journal of Plant Physiology--95-10210.1016/j.jplph.2018.03.013https://pubmed.ncbi.nlm.nih.gov/29614397/
121ProteomicsOptimisation of a serum albumin removal protocol for use in a proteomic study to identify the protein biomarkers for silent gastric ulceration in horses. Kanaporn Poltep, Parichart Tesena, Yodying Yingchutrakul, Jane Taylor, Tuempong Wongtawan2018Journal of Equine Science 29-53-6010.1294/jes.29.53https://pubmed.ncbi.nlm.nih.gov/30250392/
122ProteomicsDetecting Allergens from Black Tiger Shrimp Penaeus monodon That Can Bind and Cross-link IgE by ELISA, Western Blot, and a Humanized Rat Basophilic Leukemia Reporter Cell Line RS-ATL8Thanyapat Jarupalee, Pantipa Chatchatee, Kittinan Komolpis, Narissara Suratannon, Sittiruk Roytrakul, Yodying Yingchutrakul, Wanaporn Yimchuen, Patcharavadee Butta, Alain Jacquet, Tanapat Palaga2018Allergy Asthma Immunol Res.10162-7610.4168/aair.2018.10.1.62https://pubmed.ncbi.nlm.nih.gov/29178679/
123ProteomicsPhosphoproteome Profiling of Isogenic Cancer Cell-Derived Exosome Reveals HSP90 as a Potential Marker for Human Cholangiocarcinoma. Churat Weeraphan, Amornrat Phongdara, Parunya Chaiyawat, Penchatr Diskul-Na-Ayudthaya, Daranee Chokchaichamnankit, Chris Verathamjamras, Pukkavadee Netsirisawan, Yodying Yingchutrakul, Sittiruk Roytrakul, Voraratt Champattanachai, Jisnuson Svasti, Chantragan Srisomsap2019Proteomics 1912e180015910.1002/pmic.201800159https://pubmed.ncbi.nlm.nih.gov/31054213/
124ProteomicsProteomic analysis of monkey kidney LLC-MK2 cells infected with a Thai strain Zika virus. Thamonwan Diteepeng, Sarawut Khongwichit, Atchara Paemanee, Sittiruk Roytrakul, Duncan R Smith2019Archives of Virology 1643725-73710.1007/s00705-018-04137-1https://pubmed.ncbi.nlm.nih.gov/30612200/
125ProteomicsExpression of a leptospiral leucine-rich repeat protein using a food-grade vector in Lactobacillus plantarum, as a strategy for vaccine delivery.Chattip Suphatpahirapol, Thu-Ha Nguyen, Yada Tansiri, Yodying Yingchutrakul, Sittiruk Roytrakul, Supachai Nitipan, Worawidh Wajjwalku, Dietmar Haltrich, Siriwan Prapong, Suttipun Keawsompong20193 Biotech9-32410.1007/s13205-019-1856-8https://pubmed.ncbi.nlm.nih.gov/31406646/
126ProteomicsGlycoproteomics analysis of plasma proteins associated with Opisthorchis viverrini infection-induced cholangiocarcinoma in hamster model.Pramote Sriwanitchrak, Atchara Paemanee, Sittiruk Roytrakul, Vithoon Viyanant, Kesara NaBangchang2019Asian Pacific Journal of Tropical Medicine9121142-114710.1016/j.apjtm.2016.09.013https://pubmed.ncbi.nlm.nih.gov/27955744/
127ProteomicsA proteomic analysis of the anti-dengue virus activity of andrographolide. Atchara Paemanee, Atitaya Hitakarun, Phitchayapak Wintachai, Sittiruk Roytrakul, Duncan R Smith2019Biomedicine and Pharmacotherapy109-322-33210.1016/j.biopha.2018.10.054https://pubmed.ncbi.nlm.nih.gov/30396090/
128ProteomicsA possible protein model involved in gallium arsenide leaching by Cellulosimicrobium funkei.Sirikan Maneesuwannarat, Kanjana Kudpeng, Yodying Yingchutrakul, Sittiruk Roytrakul, Alisa S. Vangnai, Mitsuo Yamashita Paitip Thiravetyan2019Minerals Engineering 137-207-21610.1016/j.mineng.2019.04.002-
129ProteomicsSerum protein expression in Equine Glandular Gastric Disease (EGGD) induced by phenylbutazone.Parichart Tesena, Yodying Yingchutrakul, Sittiruk Roytrakul, Kris Angkanaporn2019Journal of Veterinary Medical Science81-418-42410.1292/jvms.18-0679https://pubmed.ncbi.nlm.nih.gov/30674748/
130ProteomicsPorcine Epidemic Diarrhea Virus (PEDV) ORF3 Interactome Reveals Inhibition of Virus Replication by Cellular VPS36 Protein. Challika Kaewborisuth, Yodying Yingchutrakul, Sittirtuk Roytrakul and Anan Jongkaewwattana2019Viruses 11438210.3390/v11040382https://pubmed.ncbi.nlm.nih.gov/31022991/
131ProteomicsIdentification and enhancement of antioxidant P1-peptide isolated from Ganoderma lucidum hydrolysate. Sucheewin Krobthong, Yodying Yingchutrakul2020Food Biotechnology34-338-35110.1080/08905436.2020.1844228-
132ProteomicsProteomic analysis of infected primary human leucocytes revealed PSTK as potential treatment-monitoring marker for active and latent tuberculosis.Benjawan Kaewseekhao, Sittiruk Roytrakul, Yodying Yingchutrakul, Kanin Salao, Wipa Reechaipichitkul, Kiatichai Faksri2020PLoS One 154e023183410.1371/journal.pone.0231834https://pubmed.ncbi.nlm.nih.gov/32298370/
133ProteomicsShotgun Proteomic Analysis of Germinated Rice (Oryza sativa L.) under Salt Stress.Rui Li, Trilert Chaicherdsakul, Viyada Kunathigan, Sittiruk Roytrakul, Atchara Paemanee, Suthathip Kittisenachai2020Applied Science and Engineering Progress13176-8510.14416/j.ijast.2018.12.001-
134Proteomics Identification of GST Interacted Proteins under PRSV Infected Papaya Using Affinity Purification–mass Spectrometry.Aroonothai Sawwa, Yodying Yingchutrakul, Sittiruk Roytrakul, Wanwisa Siriwan and Srimek Chowpongpang2020Applied Science and Engineering Progress 133224-23210.14416/j.ijast.2019.01.006-
135ProteomicsThe C-terminally shortened analogs of a hexapeptide derived from Lingzhi hydrolysate with enhanced tyrosinase-inhibitory activitySucheewin Krobthong , Yodying Yingchutrakul, Pawitrabhorn Samutrtai, Kiattawee Choowongkomon 2021Arch Pharm (Weinheim)---10.1002/ardp.202100204https://pubmed.ncbi.nlm.nih.gov/34313364/
136ProteomicsIdentification of new 3-phenyl-1H-indole-2-carbohydrazide derivatives and their structure-activity relationships as potent tubulin inhibitors and anticancer agents: A combined in silico, in vitro and synthetic studyRungroj Saruengkhanphasit, Chutikarn Butkinaree, Narittira Ornnork, Kriengsak Lirdprapamongkol, Worawat Niwetmarin, Jisnuson Svasti, Somsak Ruchirawat, Chatchakorn Eurtivong2021Bioorganic Chemistry110-10479510.1016/j.bioorg.2021.104795https://pubmed.ncbi.nlm.nih.gov/33730670/
137ProteomicsParticulate matter and volatile organic compound phytoremediation by perennial plants: Affecting factors and plant stress responseChairat Treesubsuntorn, Ginting Dwi Setiawan, Bayu Hadi Permana, Yovita Citra, Sucheewin Krobthong, Yodying Yingchutrakul, Dian Siswanto, Paitip Thiravetyan2021Sci Total Environ---10.1016/j.scitotenv.2021.148779https://pubmed.ncbi.nlm.nih.gov/34313364/
138ProteomicsMechanisms of ozone responses in sensitive and tolerant mungbean cultivarsPiyatida Kittipornkul, Sucheewin Krobthong, Yodying Yingchutrakul, Paitip Thiravetyan2021Sci Total Environ---10.1016/j.scitotenv.2021.149550https://pubmed.ncbi.nlm.nih.gov/34426356/
139ProteomicsBioactive peptide isolated from sesame seeds inhibits cell proliferation and induces apoptosis and autophagy in leukemic cellsKamolchanok Deesrisak, Yodying Yingchutrakul, Sucheewin Krobthong, Sittiruk Roytrakul, Chawalit Chatupheeraphat, Paweena Subkorn, Usanarat Anurathapan, Dalina Tanyong2021EXCLI---10.17179/excli2021-3406https://pubmed.ncbi.nlm.nih.gov/33907539/
140ProteomicsIdentification of Low Molecular Weight Proteins and Peptides from Schistosoma mekongi Worm, Egg and Infected Mouse SeraTipparat Thiangtrongjit, Nattapon Simanon, Poom Adisakwattana, Yanin Limpanont, Phiraphol Chusongsang, Yupa Chusongsang , Onrapak Reamtong2021Biomolecules---10.3390/biom11040559https://pubmed.ncbi.nlm.nih.gov/33920436/
141ProteomicsStudy of the Lipolysis Effect of Nanoliposome-Encapsulated Ganoderma lucidum Protein Hydrolysates on Adipocyte Cells Using Proteomics ApproachSucheewin Krobthong , Yodying Yingchutrakul, Wonnop Visessanguan, Thanisorn Mahatnirunkul, Pawitrabhorn Samutrtai, Chartchai Chaichana, Phakorn Papan, Kiattawee Choowongkomon2021Foods---10.3390/foods10092157https://pubmed.ncbi.nlm.nih.gov/34574267/
142ProteomicsAndrographolide Inhibits Lytic Reactivation of Epstein-Barr Virus by Modulating Transcription Factors in Gastric CancerPraphatson Malat, Tipaya Ekalaksananan, Chukkris Heawchaiyaphum, Supawadee Suebsasana, Sittiruk Roytrakul, Yodying Yingchutrakul, Chamsai Pienton2021Microorganisms---10.3390/microorganisms9122561https://pubmed.ncbi.nlm.nih.gov/34946164/
143ProteomicsPotential Phosphorylation of Viral Nonstructural Protein 1 in Dengue Virus InfectionThanyaporn Dechtawewat, Sittiruk Roytrakul, Yodying Yingchutrakul, Sawanya Charoenlappanit, Bunpote Siridechadilok, Thawornchai Limjindaporn, Arunothai Mangkang, Tanapan Prommool, Chunya Puttikhunt, Pucharee Songprakhon, Kessiri Kongmanas, Nuttapong Kaewjew, Panisadee Avirutnan, Pa-Thai Yenchitsomanus, Prida Malasit, Sansanee Noisakran2021Viruses---10.3390/v13071393https://pubmed.ncbi.nlm.nih.gov/34372598/
144ProteomicsCharacterisation of secretome-based immune responses of human leukocytes infected with various Mycobacterium tuberculosis lineagesBenjawan Kaewseekhao, Sittiruk Roytrakul, Yodying Yingchutrakul, Marut Laohaviroj, Kanin Salao, Kiatichai Faksri 2021PeerJ.---10.7717/peerj.11565https://pubmed.ncbi.nlm.nih.gov/34141493/
145ProteomicsDiscovery of a Multifunctional Octapeptide from Lingzhi with Antioxidant and Tyrosinase Inhibitory ActivityYodying Yingchutrakul, Sucheewin Krobthong, Kiattawee Choowongkomon, Phakorn Papan, Pawitrabhorn Samutrtai, Thanisorn Mahatnirunkul, Thitikorn Chomtong, Nitipol Srimongkolpithak, Theeranuch Jaroenchuensiri, Chanat Aonbangkhen2022Pharmaceuticals (Basel)--- 10.3390/ph15060684https://pubmed.ncbi.nlm.nih.gov/35745603/
146ProteomicsComparative study on structural, biological and functional activities of hydrolysates from Adzuki bean (Vigna angularis) and mung bean (Vigna radiata) protein concentrates using Alcalase and FlavourzymeZohreh Karami, Chutikarn Butkinaree, Yodying Yingchutrakul, Nattapon Simanon, Kiattisak Duangmal2022Food Research International---10.1016/j.foodres.2022.111797-
147ProteomicsIdentification of mRNA 5' cap-associated proteins in the human malaria parasite Plasmodium falciparumChayaphat Wongsombat, Yodying Yingchutrakul, Nattida Suwanakitti, Kantinan Leetanasaksakul, Sittiruk Roytrakul, Philip James Shaw, Aiyada Aroonsri2022Mol Biochem Parasitol---10.1016/j.molbiopara.2021.111443https://pubmed.ncbi.nlm.nih.gov/34890716/
148ProteomicsPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta as a potential biomarker for Opisthorchis viverrini infection and cholangiocarcinoma.Sattrachai Prasopdee, Yodying Yingchutrakul, Sittiruk Roytrakul, Montinee Pholhelm, Teva Phanaksri, Anthicha Kunjantarachot, Jutharat Kulsantiwong, Kritiya Butthongkomvong, Smarn Tesana, Thanakrit Sathavornmanee, Veerachai Thitapakorn 2022 Parasitology---10.1017/S0031182021001694https://pubmed.ncbi.nlm.nih.gov/35234600/
149ProteomicsUtilizing Quantitative Proteomics to Identify Species-Specific Protein Therapeutic Targets for the Treatment of LeishmaniasisSucheewin Krobthong, Yodying Yingchutrakul, Pawitrabhorn Samutrtai, Atitaya Hitakarun, Suradej Siripattanapipong , Saovanee Leelayoova, Mathirut Mungthin, Kiattawee Choowongkomon2022ACS Omega---10.1021/acsomega.1c05792https://pubmed.ncbi.nlm.nih.gov/35474788/
150ProteomicsActivation of cryptic xylose metabolism by a transcriptional activator Znf1 boosts up xylitol production in the engineered Saccharomyces cerevisiae lacking xylose suppressor BUD21 genePattanan Songdech, Rawitsara Intasit, Yodying Yingchutrakul, Chutikarn Butkinaree, Khanok Ratanakhanokchai, Nitnipa Soontorngun 2022Microb Cell Fact---10.1186/s12934-022-01757-whttps://pubmed.ncbi.nlm.nih.gov/35248023/
151ProteomicsA novel nanobody as therapeutics target for EGFR-positive colorectal cancer therapy: exploring the effects of the nanobody on SW480 cells using proteomics approachThomanai Lamtha, Sucheewin Krobthong, Yodying Yingchutrakul, Pawitrabhorn Samutrtai, Christopher Gerner, Lueacha Tabtimmai, Kiattawee Choowongkomon 2022Proteome Sci---10.1186/s12953-022-00190-6https://pubmed.ncbi.nlm.nih.gov/35578244/
152ProteomicsPlasma checkpoint protein 1 (Chk1) as a potential diagnostic biomarker for opisthorchiasis and cholangiocarcinomaTeva Phanaksri, Yodying Yingchutrakul, Sittiruk Roytrakul, Sattrachai Prasopdee, Anthicha Kunjantarachot, Kritiya Butthongkomvong, Smarn Tesana, Thanakrit Sathavornmanee, Veerachai Thitapakorn 2022Cancer Biomark---10.3233/CBM-210170https://pubmed.ncbi.nlm.nih.gov/34366327/
153ProteomicsProteomic Analysis Reveals Proteins Involved in the Mode of Action of β-Citronellol Identified From Citrus hystrix DC. Leaf Against Candida albicansWatunyoo Buakaew, Rungnapa Pankla Sranujit, Chanai Noysang, Sucheewin Krobthong, Yodying Yingchutrakul, Yordhathai Thongsri, Pachuen Potup, Krai Daowtak, Kanchana Usuwanthim2022Front Microbiol---10.3389/fmicb.2022.894637https://pubmed.ncbi.nlm.nih.gov/35677908/
154ProteomicsAndrographolide Inhibits Epstein-Barr Virus Lytic Reactivation in EBV-Positive Cancer Cell Lines through the Modulation of Epigenetic-Related ProteinsPraphatson Malat, Tipaya Ekalaksananan, Chukkris Heawchaiyaphum, Supawadee Suebsasana, Sittiruk Roytrakul, Yodying Yingchutrakul , Chamsai Pientong2022Molecules---10.3390/molecules27144666https://pubmed.ncbi.nlm.nih.gov/35889536/
155ProteomicsIdentification and Characterization of a Potential Antimicrobial Peptide Isolated from Soil Brevibacillus sp. WUL10 and Its Activity against MRSA PathogensApichart Atipairin, Nuttapon Songnaka, Sucheewin Krobthong, Yodying Yingchutrakul, Thapanee Chinnawong, Thamonwan Wanganuttara 2022Trop Med Infect Dis---10.3390/tropicalmed7060093https://pubmed.ncbi.nlm.nih.gov/35736972/
156ProteomicsEvaluation of potential anti-metastatic and antioxidative abilities of natural peptides derived from Tecoma stans (L.) Juss. ex Kunth in A549 cellsSucheewin Krobthong, Yodying Yingchutrakul, Wattanapong Sittisaree, Tatpong Tulyananda, Pawitrabhorn Samutrtai, Kiattawee Choowongkomon, Udom Lao-On2022PeerJ.---10.7717/peerj.13693https://pubmed.ncbi.nlm.nih.gov/35818360/
157TranscriptomicsHigh throughput transcriptome sequencing of Hevea brasiliensis by 454 pyrosequencing for development of microsatellite markers. Kanokporn Triwitayakorn, Pornsupa Chatkulkawin, Supanath Kanjanawattanawong, Supajit Sraphet, Thippawan Yoocha, Duangjai Sangsrakru, Juntima Chanprasert, Chumpol Ngamphiw, Nukoon Jomchai, Kanikar Therawattanasuk, Sithichoke Tangphatsornruang 2011DNA Research 186471-48210.1093/dnares/dsr034-
158TranscriptomicsEfficient transcription of the larvicidal cry4Ba gene from Bacillus thuringiensis in transgenic chloroplasts of the green algal Chlamydomonas reinhardtii. Thanate Juntadech, Kittisak Yokthongwattana, Sithichoke Tangphatsornruang, Yun-kiam Yap, Gerd Katzenmeier, Chanan Angsuthanasombat 2012Advances in Bioscience and Biotechnology 3-362-36910.4236/abb.2012.34052 -
159TranscriptomicsTranscriptome assembly and expression data from normal and mantled oil palm fruit. Jeremy R. Shearman, Chatchawan Jantasuriyarat, Duangjai Sangsrakru, Thippawan Yoocha, Apichart Vannavichit, Sithichoke Tangphatsornruang and Somvong Tragoonrung 2012Dataset Papers in Biology 2013--67092610.7167/2013/670926-
160TranscriptomicsTranscriptome analysis of normal and mantled oil palm flower and fruit. Jeremy R Shearman, Chatchawan Jantasuriyarat, Duangjai Sangsrakru, Thippawan Yoocha, Apichart Vannavichit, Somvong Tragoonrung and Sithichoke Tangphatsornruang 2013Genomics 101-306-31210.1016/j.ygeno.2013.02.012https://pubmed.ncbi.nlm.nih.gov/23474141/
161TranscriptomicsDetermination of the Half-Life of Chloroplast Transcripts in Tobacco Leaves. In Chloroplast Biotechnology: Methods and Protocols Sithichoke Tangphatsornruang and John C. Gray 2014(Springer Science and Business Media, LLC, New York)1132-221-23410.1007/978-1-62703-995-6_13https://pubmed.ncbi.nlm.nih.gov/24599856/
162TranscriptomicsCharacterization of rubber tree microRNA in phytohormone response using large genomic DNA libraries, promoter sequence and gene expression analysis. Supanath Kanjanawattanawong, Sithichoke Tangphatsornruang, Kanokporn Triwitayakorn, Panthita Ruangareerate, Duangjai Sangsrakru, Suthasinee Somyong, Jarunya Narangajavana 2014Molecular Genetics and Genomics 2895921-93310.1007/s00438-014-0862-0https://pubmed.ncbi.nlm.nih.gov/24859131/
163TranscriptomicsTranscriptome Analysis Reveals Pathogenicity and Evolutionary History of the Pathogenic Oomycete Pythium insidiosum. Theerapong Krajaejun, Tassanee Lerksuthirat, Gagan Garg, Tassanee Lowhnoo, Wanta Yingyong, Rommanee Khositnithikul, Sithichoke Tangphatsornruang, Prapat Suriyaphol, Shoba Ranganathan, Thomas D Sullivan 2014Fungal Biology 1187640-65310.1016/j.funbio.2014.01.009https://pubmed.ncbi.nlm.nih.gov/25088078/
164TranscriptomicsLarge-scale SNP discovery through RNA-seq and SNP genotyping by targeted enrichment sequencing in cassava. Wirulda Pootakham, Jeremy R Shearman, Panthita Ruang-areerate, Chutima Sonthirod, Duangjai Sangsrakru, Nukoon Jomchai, Thippawan Yoocha, Kanokporn Triwitayakorn, Somvong Tragoonrung, Sithichoke Tangphatsornruang. 2014PLoS One 912e11602810.1371/journal.pone.0116028https://pubmed.ncbi.nlm.nih.gov/25551642/
165TranscriptomicsElucidation of the molecular responses to waterlogging in Jatropha roots by transcriptome profiling. Piyada Juntawong, Anchalee Sirikhachornkit, Rachaneeporn Pimjan, Chutima Sontirod, Duangjai Sangsrakru, Thippawan Yoocha, Sithichoke Tangphatsornruang, Peerasak Srinives 2014Frontiers in Plant Science5-65810.3389/fpls.2014.00658https://pubmed.ncbi.nlm.nih.gov/25520726/
166TranscriptomicsSNP Identification from RNA Sequencing and Linkage Map Construction of Rubber Tree for Anchoring the Draft Genome. Jeremy R. Shearman, Duangjai Sangsrakru, Nukoon Jomchai, Panthita Ruang-areerate, Chutima Sonthirod, Chaiwat Naktang, Kanikar Theerawattanasuk, Somvong Tragoonrung, Sithichoke Tangphatsornruang 2015PLoS One 10-e012196110.1371/journal.pone.0121961https://pubmed.ncbi.nlm.nih.gov/25831195/
167TranscriptomicsDe novo Transcriptome Analysis of Apical Meristem of Jatropha spp. Using 454 Pyrosequencing Platform and Identification of SNP and EST-SSR Markers. Kularb Laosatit, Patcharin Tanya, Prakit Somta, Panthita Ruang-areerate, Chutima Sontirod, Sithichoke Tangphatsornruang, Piyada Juntawong, Peerasak Srinives 2016Plant Molecular Biology Reporter344786-79310.1007/s11105-015-0961-z-
168TranscriptomicsDifferentially expressed transcripts in stomach of Penaeus monodon in response to AHPND infection. Wipasiri Soonthornchai, Sage Chaiyapechara, Sirawut Klinbunga, Wilawan Thongda, Sithichoke Tangphatsornruang, Thippawan Yoocha, Padermsak Jarayabhand, Pikul Jiravanichpaisal2016Developmental & Comparative Immunology 65-53-6310.1016/j.dci.2016.06.013https://pubmed.ncbi.nlm.nih.gov/27339467/
169TranscriptomicsA phenotypic test for delay of abscission and non-abscission oil palm fruit and validation by abscission marker gene expression analysis. Kim Fooyontphanich, Fabienne Morcillo, Phillippe Amblard, Myriam Collin, Chatchawan Jantasuriyarat, Jean Luc Verdeil, Sithichoke Tangphatsornruang, Timothy J. Tranbarger2016Acta Horticulturae 1119-97-10410.17660/ActaHortic.2016.1119.13-
170TranscriptomicsTranscriptome-based discovery of pathways and genes related to reproduction of the black tiger shrimp (Penaeus monodon). Tanaporn Uengwetwanit, Pattareeya Ponza, Duangjai Sangsrakru, Duangdao Wichadakul, Supawadee Ingsriswang, Rungnapa Leelatanawit, Sirawut K Klinbunga, Sithichoke Tangphatsornruang, Nitsara Karoonuthaisiri 2017Marine Genomics 37-69-7310.1016/j.margen.2017.08.007https://pubmed.ncbi.nlm.nih.gov/28899645/
171TranscriptomicsDevelopment of a novel reference transcriptome for scleractinian coral Porites lutea using single-molecule long-read isoform sequencing (Iso-seq). Wirulda Pootakham, Chaiwat Naktang, Chutima Sonthirod, Thippawan Yoocha, Duangjai Sangsrakru, Nukoon Jomchai, Lalita Putchim, Sithichoke Tangphatsornruang 2018Frontier in Marine Science5-12210.3389/fmars.2018.00122-
172TranscriptomicsUncovering full-length transcripts of sugarcane transcriptome using single-molecule long-read sequencing. Jittima Piriyapongsa, Pavita Kaewprommal, Yuttachon Promworn, Sirintra Vaiwsri, Warodom Wirojsirasak, Philip J Shaw, Wirulda Pootakham, Thippawan Yoocha, Duangjai Sangsrakru, Sithichoke Tangphatsornruang, Sissades Tongsima, Somvong Tragoonrung 2018Peer J6-e581810.7717/peerj.5818https://pubmed.ncbi.nlm.nih.gov/30397543/
173TranscriptomicsTranscriptome analysis of oil palm inflorescences revealed candidate genes for an auxin signaling pathway involved in parthenocarpy. Suthasinee Somyong, Kitti Walayaporn, Nukoon Jomchai, Chaiwat Naktang, Tanapong Yodyingyong, Chalermpol Phumichai, Wirulda Pootakham, Sithichoke Tangphatsornruang 2018Peer J 6-e597510.7717/peerj.5975https://pubmed.ncbi.nlm.nih.gov/30588395/
174TranscriptomicsHeat-induced shift in coral microbiome reveals several members of the Rhodobacteraceae family as indicator species for thermal stress in Porites lutea. Wirulda Pootakham, Wuttichai Mhuantong, Thippawan Yoocha, Lalita Putchim, Nukoon Jomchai, Chutima Sonthirod, Chaiwat Naktang, Wasitthee Kongkachana, Sithichoke Tangphatsornruang 2019MicrobiologyOpen8-e93510.1002/mbo3.935https://pubmed.ncbi.nlm.nih.gov/31544365/
175TranscriptomicsUnraveling vascular development-related genes in laticifer-containing tissue of rubber tree by high-throughput transcriptome sequencing. Pakatorn Sae-Lim, Chaiwat Naktang, Thippawan Yoocha, Kanlaya Nirapathpongporn, Unchera Viboonjun, Panida Kongsawadworakul, Sithichoke Tangphatsornruang and Jarunya Narangajavana 2019Current Plant Biology1910010011210.1016/j.cpb.2019.100112-
176TranscriptomicsTranscriptome analyses reveal the synergistic effects of feeding and eyestalk ablation on ovarian maturation in black tiger shrimp.Kanchana Sittikankaew, Wirulda Pootakham, Chutima Sonthirod, Duangjai Sangsrakru, Thippawan Yoocha, Jutatip Khudet, Intawat Nookeaw, Umaporn Uawisetwathana, Wanilada Rungrassamee, Nitsara Karoonuthaisiri2020Scientific Reports 10-1-1310.1038/s41598-020-60192-2https://pubmed.ncbi.nlm.nih.gov/32094422/
177TranscriptomicsA Novel Full-Length Transcriptome Resource for Black Tiger Shrimp (Penaeus monodon) Developed Using Isoform Sequencing (Iso-Seq) Wirulda Pootakham, Tanaporn Uengwetwanit, Chutima Sonthirod, Kanchana Sittikankaew, Nitsara Karoonuthaisiri 2020Frontier in Marine Science 7-10-1210.3389/fmars.2020.00172-
178TranscriptomicsThe Genome and Transcriptome Analysis of the Vigna mungo Chloroplast. Wanapinun Nawae, Chutintorn Yundaeng, Chaiwat Naktang, Wasitthee Kongkachana, Thippawan Yoocha, Chutima Sonthirod, Nattapol Narong, Prakit Somta, Kularb Laosatit, Sithichoke Tangphatsornruang and Wirulda Pootakham2020Plants 99124710.3390/plants9091247https://pubmed.ncbi.nlm.nih.gov/32967378/
179TranscriptomicsDifferential expression between drought-tolerant and drought-sensitive sugarcane under mild and moderate water stress as revealed by a comparative analysis of leaf transcriptome. Wanapinun Nawae, Jeremy R. Shearman, Sithichoke Tangphatsornruang, Prapat Punpee, Thippawan Yoocha, Duangjai Sangsrakru, Chaiwat Naktang, Chutima Sonthirod, Warodom Wirojsirasak, Kittipat Ukoskit , Klanarong Sriroth , Peeraya Klomsa-ard and Wirulda Pootakham 2020Peer J 8-e960810.7717/peerj.9608https://pubmed.ncbi.nlm.nih.gov/33240580/
180TranscriptomicsTranscriptome sequencing revealed the influence of blue light on the expression levels of light-stress response genes in Centella asiaticaWanapinun Nawae,Thippawan Yoocha,Nattapol Narong,Atchara Paemanee,Yanisa Ketngamkum,Kanokwan Romyanon,Theerayut Toojinda,Sithichoke Tangphatsornruang,Wirulda Pootakham2021PlosOne1611e026046810.1371/journal.pone.0260468https://pubmed.ncbi.nlm.nih.gov/34843573/
181TranscriptomicsComparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodonZulema Udaondo ,Kanchana Sittikankaew ,Tanaporn Uengwetwanit ,Thidathip Wongsurawat ,Chutima Sonthirod ,Piroon Jenjaroenpun ,Wirulda Pootakham ,Nitsara Karoonuthaisiri andIntawat Nookaew 2021Life11886210.3390/life11080862https://pubmed.ncbi.nlm.nih.gov/34440606/
182TranscriptomicsHigh Quality Aspergillus aculeatus Genomes and Transcriptomes: a Platform for Cellulase Activity Optimization towards Industrial Applications. Wuttichai Mhuantong, Salisa Charoensri, Aphisit Poonsrisawat, Wirulda Pootakham, Sithichoke Tangphatsornruang, Chatuphon Siamphan, Surisa Suwannarangsee, Lily Eurwilaichitr, Verawat Champreda, Varodom Charoensawan, Duriya Chantasingh2021Frontiers in Bioengineering and Biotechnology8-60717610.3389/fbioe.2020.607176https://pubmed.ncbi.nlm.nih.gov/33585410/
183TranscriptomicsMulti-scale comparative transcriptome analysis reveals key genes and metabolic reprogramming processes associated with oil palm fruit abscission. Kim Fooyontphanich, Fabienne Morcillo, Thierry Joët, Stéphane Dussert, Julien Serret, Myriam Collin, Philippe Amblard, Sithichoke Tangphatsornruang, Peerapat Roongsattham, Chatchawan Jantasuriyarat, Jean-Luc Verdeil, Timothy J. Tranbarger 2021BMC Plant Biology 2111-110.1186/s12870-021-02874-1https://pubmed.ncbi.nlm.nih.gov/33573592/