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Morphological trait, molecular genetic evidence and proteomic determination of different chickens (Gallus gallus) breeds
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Metadata
Document Title
Morphological trait, molecular genetic evidence and proteomic determination of different chickens (Gallus gallus) breeds
Author
Likittrakulwong W., Poolprasert P., Roytrakul S.
Name from Authors Collection
Affiliations
Faculty of Food and Agricultural Technology, Pibulsongkram Rajabhat University, Phitsanulok, Thailand; Faculty of Science and Technology, Pibulsongkram Rajabhat University, Phitsanulok, Thailand; National Center for Engineering and Biotechnology (BIOTEC), National Science and Technology Development AgencyPathumthani, Thailand
Type
Article
Source Title
Journal of Applied Biology and Biotechnology
ISSN
2347212X
Year
2019
Volume
7
Issue
1
Page
65-70
Open Access
All Open Access, Bronze, Green
Publisher
Open Science Publishers LLP Inc.
DOI
10.7324/JABB.2019.70112
Format
Abstract
The phenotypic characterization, genetic variation and proteomic analysis of three main male chicken (Gallus gallus) breeds were investigated. These included hybrid red jungle fowl with the native chicken breed (Kai-Tor), white tail yellow chicken (WTYC) and commercial layer hen (HL). A phenetic analysis found that two major clades were observed in which the first two clades of Kai-Tor (clade A) and HL (clade B) were related. Meanwhile, WTYC was distinctly separated from the others. In terms of genetic diversity, three haplotypes were observed with 0.343 ± 0.097 of haplotypes diversity (Hd). The nucleotide diversity (Pi) of all samples was 0.00057 which conformed to low genetic diversity. In terms of protein characterization, two potential protein biomarkers were found in Kai-Tor serum samples namely 1) ATP-dependent RNA helicase DHX34 (DHX34; Accession number: XP_015128539.1) and 2) histone-lysine N-methyltransferase SETDB1 isoform X6 (SETDB1; Accession number: XP_015135538.1). Only one biomarker peptide was detected in HL (Cell division cycle 7-related protein kinase; CDC7; Accession number: XP_422347.5) as well as in WTYC (Bloom syndrome protein; BLM; Accession number: Q9I920). © 2019 Wirot Likittrakulwong, et al.
Keyword
Chicken | Genetic variation | Morphological character | mtDNA | Protein identification
Industrial Classification
Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Knowledge Taxonomy Level 3
Funding Sponsor
Pibulsongkram Rajabhat University
License
CC BY-NC-SA
Rights
Author
Publication Source
Scopus