-
A class-wide phylogenetic assessment of Dothideomycetes
- Back
Share
Document Title
A class-wide phylogenetic assessment of Dothideomycetes
Author
Schoch CL, Crous PW, Groenewald JZ, Boehm EWA, Burgess TI, de Gruyter J, de Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, Hyde KD, Jones EBG, Kohlmeyer J, Kruys A, Li YM, Lucking R, Lumbsch HT, Marvanova L, Mbatchou JS, Mcvay AH, Miller AN, Mugambi GK, Muggia L, Nelsen MP, Nelson P, Owensby CA, Phillips AJL, Phongpaichit S, Pointing SB, Pujade-Renaud V, Raja HA, Plata ER, Robbertse B, Ruibal C, Sakayaroj J, Sano T, Selbmann L, Shearer CA, Shirouzu T, Slippers B, Suetrong S, Tanaka K, Volkmann-Kohlmeyer B, Wingfield MJ, Wood AR, Woudenberg JHC, Yonezawa H, Zhang Y, Spatafora JW
Name from Authors Collection
Scopus Author ID
16319823700
Affiliations
National Institutes of Health (NIH) - USA; NIH National Library of Medicine (NLM); Royal Netherlands Academy of Arts & Sciences; Westerdijk Fungal Biodiversity Institute (KNAW); Murdoch University; United States Department of Agriculture (USDA); University of Graz; Hirosaki University; National Museum of Nature and Science; Field Museum of Natural History (Chicago); Mae Fah Luang University; National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC); University of North Carolina; University of North Carolina Chapel Hill; Uppsala University; Masaryk University Brno; DePaul University; Oregon State University; Illinois Natural History Survey; University of Illinois System; University of Illinois Urbana-Champaign; University of Chicago; University of Minnesota System; University of Minnesota Twin Cities; Universidade Nova de Lisboa; Prince of Songkla University; University of Hong Kong; Centre National de la Recherche Scientifique (CNRS); CIRAD; Universite Clermont Auvergne (UCA); University of Illinois System; University of Illinois Urbana-Champaign; University of Illinois System; University of Illinois Chicago; University of Illinois Chicago Hospital; Universidad Politecnica de Madrid; Tuscia University; Tottori University; National Research Foundation - South Africa; University of Pretoria; Chinese Academy of Forestry; Research Institute of Resources Insects, CAF
Type
Review
Source Title
STUDIES IN MYCOLOGY
Year
2009
Issue
64
Page
42005
Open Access
Green Submitted, Green Published, gold
Publisher
CENTRAALBUREAU SCHIMMELCULTURE
DOI
10.3114/sim.2009.64.01
Format
Abstract
We present a comprehensive phylogeny derived from 5 genes, nucSSU, nucLSU rDNA, TEF1, RPB1 and RPB2, for 356 isolates and 41 families (six newly described in this volume) in Dothideomycetes. All currently accepted orders in the class are represented for the first time in addition to numerous previously unplaced lineages. Subclass Pleosporomycelidae is expanded to include the aquatic order Jahnulales. An ancestral reconstruction of basic nutritional modes supports numerous transitions from saprobic life histories to plant associated and lichenised modes and a transition from terrestrial to aquatic habitats are confirmed. Finally, a genomic comparison of 6 dothideomycete genomes with other fungi finds a high level of unique protein associated with the class, supporting its delineation as a separate taxon.
Keyword
Ascomycota | Dothideomyceta | fungal evolution | lichens | multigene phylogeny | Pezizomycotina | phylogenomics | plant pathogens | saprobes | Tree of Life
Funding Sponsor
NIH; National Library of Medicine; NSF [DEB-0717476, DEB-0732993]
License
CC BY-NC-ND
Rights
CBS-KNAW Fungal Biodiversity Centre
Publication Source
WOS