-
Donghicola mangrovi sp. nov., a member of the family Rhodobacteraceae isolated from mangrove forest in Thailand
- Back
Metadata
Document Title
Donghicola mangrovi sp. nov., a member of the family Rhodobacteraceae isolated from mangrove forest in Thailand
Author
Charoenyingcharoen P, Kim JS, Theeragool G, Lee KC, Yukphan P, Lee JS
Name from Authors Collection
Affiliations
National Science & Technology Development Agency - Thailand; National Center Genetic Engineering & Biotechnology (BIOTEC); Korea Research Institute of Bioscience & Biotechnology (KRIBB); Kasetsart University; University of Science & Technology (UST)
Type
Article
Source Title
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Year
2021
Volume
71
Issue
1
Open Access
Bronze
Publisher
MICROBIOLOGY SOC
DOI
10.1099/ijsem.0.004570
Format
Abstract
Two novel Gram-stain-negative, rod-shaped and non-motile bacterial strains, designated B5-SW-15(T) and C2-DW-16, were isolated from water collected in mangrove forests in Ranong Province, Thailand. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains B5-SW-15(T) and C2-DW-16 belonged to the genus Donghicola and were most closely related to Donghicola tyrosinivorans DSM 100212(T) (98.2 and 98.1%, respectively) and Donghicola eburneus DSM 29127(T) (97.7 and 97.6%, respectively). The average nucleotide identity and digital DNA-DNA hybridization values between strain B5-SW-15(T), strain C2-DW-16 and related species were 95.8 and 71.6% (to strain C2-DW-16), 76.8 and 21.3% (to D. tyrosinivorans DSM 100212(T)) and 80.3 and 24.2 % (to D. eburneus DSM 29127(T)), respectively. The predominant cellular fatty acids (>5 %) were summed feature 8 (C-18:1 omega 6c and/or C-18:1 omega 7c), C-16:0 and C-12:1 3-OH. Ubiquinone Q-10 was the sole respiratory quinone. DNA G+C contents of the isolates were 61.0 and 61.2 mol% based on whole genome sequences. Strains B5-SW-15(T) and C2-DW-16 contained aminolipid, phosphatidylcholine, phosphatidylethanolamine and phosphatidylglycerol as the major polar lipids. On the basis of the results from phenotypic, chemotaxonomic and phylogenetic analyses, strains B5-SW-15(T) and C2-DW-16 constitute a novel species of the genus Donghicola in the family Rhodobacteraceae for which the name Donghicola mangrovi sp. nov. is proposed. The type strain is B5-SW-15(T) (=BCC 56522(T)=TBRC 9562(T)=KCTC 72743(T)).
Keyword
Industrial Classification
Knowledge Taxonomy Level 1
Knowledge Taxonomy Level 2
Knowledge Taxonomy Level 3
Funding Sponsor
National Center for Genetic Engineering and Biotechnology (BIOTEC); Korea Research Institute of Bioscience and Biotechnology (KRIBB) Research Initiative Program
Publication Source
WOS